Results

Uncovering Novel Genomes from Earth’s Microbiomes
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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JGI User Executive Committee Expands
… of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on … Area. He has partnered with the JGI through several user programs. He’s also bringing his fungal genetics expertise …
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … and their evolution could provide strategies for converting plant waste into sugars for  biofuel production. …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… analysis capability available through the  Community Science Program (CSP) . This includes mass … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? … on a peer-reviewed competitive basis via its  User Programs . Q:  Are applicants outside of JGI eligible to …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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