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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as …
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Waiting to Respire
Communications , two research teams joined forces and data sets to describe bacterial genomes for related … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research …
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … can uncover more about cellulose-degrading microbes. The new technique is another tool for microbial ecologists to … reconstruct a high-quality draft co-assembled genome for a new genus level member of the novel candidate phylum …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 … and leading to the discovery of features such as a new genetic code. More recently reported in Nature , she led …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more … ,” Gonzalez-Rizzo explained. “This kind of discovery opens new questions about bacterial morphotypes that have never …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in … on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library …
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The Power of One, Amplified
… of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … another might exhibit few limitations to interactions and new connections, thus sharing more ideas, similar to the …
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Plant-Microbial Interactions Group
… atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: Katsuma Yonehara (Tokyo University) …
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