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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … were nominated, representing a breadth of institutions, research topics and career stages. The election period …
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JGI announces 2024 New Investigator portfolio
… eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted … savviness of microbial ecosystems at the forest floor and along ocean shores. Their results could bring key insights …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a … the Human Genome Project out to the future of the institution. Their talks shed light on how the JGI was established, … Director of DOE’s Office of Biological and Environmental Research “There are two kinds of scientific revolutions,” …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy Joint Genome …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … to large and even giant. The genomes of giant viruses are on the order of 100 times the size of what has typically … study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and ‘omics techniques to experimentally determine … Antarctic Science program (project 4031). The work conducted by the US Department of Energy Joint Genome …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … labeled compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom provided background on the …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … by the U.S. Department of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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How Filamentous Fungi Sense Food
… model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … fungus  Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell …
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How Maize Makes An Antibiotic Cocktail
… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( … protect maize by fending off fungal and microbial infections. Scientists had assumed that maize synthesizes these … entailing the function of more than a dozen enzymes. But researchers have now revealed that just a handful of enzymes …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … bean’s close relative, as a biofuel. To this end, a team of researchers led by Jeremy Schmutz of the JGI and the …
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