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Hiroshi Otani
… activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … He is particularly interested in understanding how, when and why microbes decide to produce which …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these … nitrogen and carbon, or how freshwater ecosystems process methane and organic matter.  However, to get all of the …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary … at the University of Rhode Island, as a Senior Scientist at Warp Drive Bio, and as a bioinformatics HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" …
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Frederik Schulz
… the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in … A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. 2022. …
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Doubling Down on Known Protein Families
… approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls … repository of groundbreaking insights, significantly expanding the horizons of potential functions across various …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In return for their services, bees eat …
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Len Pennacchio
… on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint … at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC … 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human …
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Marianne Buscaglia
Marianne is an affiliate researcher who uses metagenomics to study giant viruses in cold marine …
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Igor Grigoriev
… joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint … at the DOE Joint Genome Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct …
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John Vogel
… as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an …
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2024 Progress Report
… (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data … U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, … in studies of complex biological and environmental systems. We optimize our service to the community through responsibly …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for …
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