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… Accepted proposals emphasize JGI interests in algae and … plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … is interested in understanding which species of mycorrhizal fungi are important for poplar plant health, in part to …

… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  … data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …

… Analysis reveals cotton genome stability across global … around two varieties: 95 percent of what is grown is known as Upland cotton ( Gossypium hirsutum ), while the remaining … is almost entirely made up of cellulose and it is a fiber model to understand the molecular development of cellulose. …

… Using the IMG/M data portal, researchers have identified a virus protein tied … in soil viruses that may promote soil health. The work was enabled in part by a community data portal of the U.S. … — replicating itself.  Chitin is found in the cell walls of fungi and the exoskeleton of insects. It is one of the most …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome … Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …

… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match characteristics — … kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of analysis would provide a …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users … Investigator Providing a general orientation to JGI systems to Investigators Preparation of formal Statement of …

… A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what … and use the data we generated to train machine learning models now publicly available for the research community,” …

… Journal publication caps JGI pilot project with fledgling Florida … waters and clouds of insects hover just above. Described as a “river of grass” that stretches some 580,000 square … across southern Florida, they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. …

… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, … Emma Timmins-Schiffman, Andressa M. Venturini, Valentin Waschulin, Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, … including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, …

… Proposals aim to sequence and annotate genomes from Antarctica to … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of … bacteria play on mating habits of Mucoromycota fungi, and their effects on these oil-producing species. …

… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , … an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play important roles in areas ranging from industrial …