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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science User Facility, was supported by the …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources to …
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Fishing for Novel Cellulose Degraders
… hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly … led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the …
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Decoding Yellowstone’s Microbial Mats
… began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …
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Accelerating Metagenomics Discoveries with Deep Learning
… a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …
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Fungal & Algal Program User Advisory Committee
… & Algal Program Advisory Committee is chartered by the Science Program Heads and report back to them. The Committee … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
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Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI
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