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JGIota: Looking Back at Sequencing for Soybeans
… that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for … researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and Sebastien Duplessis …
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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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Tina Clarke
… in Psychology from Sonoma State University. Early on Tina knew the importance of understanding human and group … relations matters and coaching supervisors and managers. Years later she received her MA degree in Counseling from … (SAP Acquired Company), Dublin, CA, HR Manager 2000 – 2007 New Era of Networks (Sybase Acquired Company), Pacheco, CA …
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Streamlining Regulon Identification in Bacteria
… environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … alternative sigma factors to initiate transcription of gene sets associated with functions like stress responses and … addressed in the study were found to control more than 100 genes, one of which was directly characterized by …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …
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Accelerating Metagenomics Discoveries with Deep Learning
… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … a foundational data set that is now available through a new  single-cell data viewer that was collaboratively …
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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Microbial Genomics & Metagenomics (MGM) Workshop
… users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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