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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … to maximize returns on these advances. Over the last two decades, Stable Isotope Probing (SIP) has opened vast …
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Learning to Look
… Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, … his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … The study was funded by Natural Sciences and Engineering Research …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … Schulz, Abergel and Woyke summarize insights from three decades of work on giant viruses. Isolating and …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … MycoCosm and Fungal Program pages ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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