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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a … ecologically successful,” Wint said. “Fungi play an important role in the earth’s ecosystem,” said Salamov, one of Wint’s mentors and a data …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for … the years. During your career, I witnessed you design and model what great research support is at the Laboratory.” … address some of the most pressing challenges of our time. For more information, please visit  …
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Four Researchers Join JGI User Executive Committee
… State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … science. Bik and her research group are regular participants of the JGI annual user meeting and New Lineages of Life … genomics, metabolic engineering, synthetic biology of non-model microbes, and biomanufacturing of sustainable fuels, …
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How Maize Makes An Antibiotic Cocktail
… The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … plants make terpenoids, which carry out a diverse array of functions, including acting as antibiotics. But zealexins …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … The weedy grass was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon …
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Jeremy Schmutz
… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. …
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … cold environments occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … Research Council (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted …
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Streamlining Regulon Identification in Bacteria
… genome science user facility, connecting genes to functions is part of the mission of the U.S. Department of … regulation is critical to ensuring genes vital for growth and survival across various environments are … While characterizing sigma factors is the most straightforward application of the technology, in principle, …
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Fishing for Novel Cellulose Degraders
… The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … to learn more about what microbes are present in any given ecosystem—particularly those that are in low abundances—and … The team first tested the approach on bacterial laboratory models to set a reference for its performance, and then …
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Richard Fox
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Finding the Fermenters
… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … Fermentative metabolism occurs in environments such as ruminant guts, sediments, and anaerobic bioreactors. Aside from … project . They also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. …
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