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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … genetic material, thus bypassing the need to culture these microbes in the lab. After joining the JGI, he formed the …
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Boosting Small Molecule Production in Super “Soup”
… pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to …
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Triggering Morel Fruiting
… part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … delicacy, but also because they influence geochemical cycling in forest ecosystems. By deciphering the … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant metabolic changes in marine microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in …
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Robert Bowers
Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a … mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … help researchers better model global carbon and nitrogen cycling. Summary To shed light on lichen, an international … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for …
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96
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