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… or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are these … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …

… samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …

Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in … with her study of microbes in California’s manmade water transport canals. Inspired by Randall Munroe’s xkcd …

… samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … analysis for nitrogen and carbon concentrations along with water content. The class had to work collaboratively and … This was a first of its kind project, but it is a great model of how the JGI can partner and help train the …

… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior … 2021. A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 8674:00585-7. Nayfach S et al. …

… biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and …

… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . At the …

… of Wisconsin-Madison and a co-investigator in the Great Lakes Bioenergy Research Center. Her research focus is … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on … of Delaware. His lab is interested in how microbial communities can efficiently degrade complex polymers that …

Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … Working together, they found most bacterial genomes from water and soil communities were at least 80% complete when studied with …