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Making a Lichen Together
… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one … finding that each lichen partner can sexually reproduce: genetic recombination during sex could increase the fitness of …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … that feels especially relevant to living on a changing planet. Transcript for Audio Two special days occur in April: … University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Virus-Microbe Interactions of Mud Island Mangroves
University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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Identification of synthetic consortia from a set of plant‐beneficial bacteria
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Parallel Evolution of Nacre Building Gene Sets in Molluscs
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … team to associate climate adaptations with switchgrass biology. Switchgrass has a large polyploid genome, which … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … is a technique researchers can use to integrate large genetic payloads directly into diverse microbes. Combining … JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. luminescens …
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Learning to Look
… expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of … As their small genomes can be easily manipulated through genetic engineering, inoviruses are used for several …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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Next generation sequencing data of a defined microbial mock community
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