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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and …
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A Grass Model to Help Improve Giant Miscanthus
… stressors such as drought and temperatures. Summary Images of giant miscanthus often appear in discussions of … at CABBI and elsewhere are following up on these discoveries to develop new varieties of Miscanthus as a source … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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Mindfully Moving JGI
… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings to a new 4-story building 20 miles away in another city and county began more than …
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JGI User Executive Committee Expands
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Products
Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … Pool of variant libraries; sample sequencing to determine coverage of variants depends on project Fungal Minimal Draft …
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Progress Reports: 2002–2020
Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress … Report … FY14 Progress Report … FY13 Progress Report … FY12 Progress Report … FY11 Progress Report … FY10 Progress … Report … FY07 Progress Report … FY06 Progress Report … FY02–FY05 Progress Reports …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the … Science Program proposal that Martin submitted in 2012. At that time, the field had surveyed many different … tropics.”  Francis Martin will be a keynote speaker at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … as well as nitrogen fixation; and has enabled discoveries in additional crops such as peanuts, black-eyed …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified … species, each organism has a relatively small set of around 20 ATs. These ATs have maintained a small and relatively … kingdoms, with archaea having around 15, eubacteria around 25, and eukaryotes having slightly larger numbers due to …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … to functionally link gene families to photosynthesis and discover gene functions that may be relevant to both algae and …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students from UC … I was so impressed with the work everyone has done.” The 2020 JGI-UC Merced interns and mentor/s: Brendan Blasius & …
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A Collaboration to Improve Plant Genome Annotations Across Species
… plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … we are looking at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is … to standardize the experimental protocols. Then, in 2020, seven more groups joined the project to contribute to …
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