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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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User Executive Committee Charter
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Meta-omics survey of [NiFe]-hydrogenase genes fails to capture drastic variations in H2-oxidation activity measured in three soils exposed to H2
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Game On: High School Students Drive Everglades Metagenomics Study
… in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the … with the question: Do you want to find out what is in this soil? Jonathan had been reaching out to many researchers with … to do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …
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Triggering Morel Fruiting
… litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying … while increasing the organic matter and fertility of the soil. Morels (Morchella spp.) were previously considered … O’Donnell & Volk) to successfully fruit in common farmland soils. Compared to the contingent fruiting in the wild, this …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Transcriptional and metabolic stasis define desiccation-induced dormancy in the soil bacterium Arthrobacter sp. AZCC_0090 until water vapor initiates resuscitation
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Building Sphagnum Genomic Resources
… estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can also act as a …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other organisms. … can do. For example, understanding virus-host dynamics in soil microbiomes could allow for more accurate ecosystem … microbial genes. Eventually, whether the goal is improving soil microbiomes for carbon capture or removing harmful …
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