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JGI Workshop at 2025 Aquatic Sciences Meeting
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … associated genes are great resources for bioremediation, new agricultural applications or life-saving drugs. A better … for 35 species representing all major evolutionary lineages in the land plant tree of life. Ultimately, the …
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Emiley Eloe-Fadrosh
… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … EA, et al. 2016. Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. Nature …
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Three Join the JGI User Executive Committee
JGI User Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Laboratory, another DOE user facility, she will leverage her understanding of user facility operations and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video … (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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2021 Progress Report
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … available to the research community, each offering specific features or tools. The U.S. Department of Energy (DOE) Joint …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … . The team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … rotation, but soybean ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These … to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to …
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