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Adopt-A-Genome
… and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome … project got started. Plus, Kalyani Maitra (California State Fresno) and two students, Angela and Mark …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to … done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … — to make them more user accessible Synthetic Biology Informatics Group : a team that develops data science tools …
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Simon Roux
… link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. … host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: An integrated …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … of Technology he developed a high throughput approach for isolating individual bacterial cells and amplifying … in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated … A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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JGI Announces 2025 New Investigator Portfolio
Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; [middle] … courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have not led any … fungi, the effects of biochar on rhizosphere microbiomes, and the metabolic pathways of algae. They will …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered … establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a research article. Speakers will …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … familiar with: differentiating into male and female sexes. For the first time, the sex chromosomes of shrub willow have … structure. Scientists found both a gene likely important for sex determination and a shared genetic architecture with …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada … ecology. We also know little about where to collect the California Cone Snail  Californiconus californicus (and cone …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and … studied? Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps …
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The Soil Blooms Green
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