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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … set of genes impacted by drought is associated with the symbiotic relationship between plant roots and arbuscular …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … D. et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature 536 (7615), 179 Hatzenpichler, R. et … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … analyses) to break up the compounds and to puzzle out their structures. Their results indicate that anaerobic fungi …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the … 10, 672-680. 2014 Blaby, et. al., Systems-level analysis of nitrogen starvation–induced modifications of carbon … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by viruses in …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … metabolism affects the biogeochemical cycling of carbon, nitrogen, and other elements, better understanding the …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … growth of Brachypodium in EcoFAB 2.0 reveals that nitrogen form and starvation modulate root exudation. … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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