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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Chromosome-scale Genome Assembly of the Most Abundant Ectomycorrhizal Fungus Cenococcum Geophilum Reveals Massive TE Expansion and RIP Defense Mechanism
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THE Bioenergy Tree
… The US Department of Energy’s favorite tree is poplar. They’re the fastest … to making poplar an economical and sustainable source of energy and materials. …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … an integral role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis … The reference genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit …
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
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Rapid Kinetic Characterization of Glycosyl Hydrolases Based on Oxime Derivatization and Nanostructure-Initiator Mass Spectrometry (NIMS)
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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Heterologous Expression and Characterization of Two 1-Hydroxy-2-Naphthoic Acid Dioxygenases from Arthrobacter phenanthrenivorans
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In vitro Characterization of Phenylacetate Decarboxylase, a Novel Enzyme Catalyzing Toluene Biosynthesis in an Anaerobic Microbial Community
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