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DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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David Goodstein
… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … extensive structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … suggest that fungi are breaking down plant fibers, like cellulose and lignin. Bacteria, on the other hand, appear to …
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Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
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Introducing New Members of the JGI User Executive Committee
JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … He also wants to assist JGI in extending its activity-based cell sorting pipelines to further the link between cellular …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … absorbable solution of sugars. But pollen contains plant cell walls, which have complex, branching chains of …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then …
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular mycorrhizal …
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