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The Power of One, Amplified
A preview of how large-scale single cell genomics … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … metagenome assembled genomes (MAGs), and that dominant populations varied with respect to the amount of within …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … terms. The JGI solicited UEC nominations in late 2022 and the election period concluded on Jan. 6, 2023. With …
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Awakening the Sleeping Carboxylase Function of Enzymes: Engineering the Natural CO2‑Binding Potential of Reductases
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring … of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of … the future of microbiome science. Organizers The EcoFAB 2025 Conference is organized by the EcoFAB Steering …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … the JGI. From these assemblies, complete or near-complete population genomes were recovered—termed …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is … hosts sessions in New Orleans and online. Register for the meeting here. Here are some sessions of interest … Hall D-F poster B25J-1604: Eoin Brodie, Berkeley Lab: “Uncovering microbial metabolic trajectories during the …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Nikos Kyrpides
Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) … Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, specifically for generating …
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