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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Computational Biology Program, along with JGI Computational Scientist Simon Prochnik, Arthur Grossman of the Carnegie …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … Grimwood (at HudsonAlpha), Cross-Field category Research Scientist Natalia Ivanova, Biology & Biochemistry category …
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Help from Citrus’ Bitter, Hardier Cousin
… to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like popcorn is literally growing on plants, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The … But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a team led by researchers from …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … their environments. Environmental DNA sequencing can help scientist to recover the genomes of these viruses and …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted … Program was brimming with excitement and determination as they came onsite. From data carpentry to science … working on isolating and cultivating and sequencing extremophile protists from a hypersaline alkaline lake in …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … and complex genome whose evolutionary history and perennial lifecycle makes it important to study directly. The large …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 …
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