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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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The Marchantia polymorpha pangenome reveals ancient mechanisms of plant adaptation to the environment
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Hiroshi Otani
… Savchenko, A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional regulator, is modulated …
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JGI & KBase at PAG XXVII
… and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list … activities of plant systems that make use of these resources will present on their work. BER Plant Genomic Science …
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Mapping the Earth’s Hidden Fungal Kingdom
… past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic … like MycoCosm , the JGI’s online fungal genomics resource platform, reveals a stark imbalance. More recently … from diverse fungi, researchers struggle to identify and classify new species from environmental samples. …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling … sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, … publication in a reputable scientific journal. It was gratifying to see the empowerment displayed across each of their …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also yielding and supporting many high-impact … of genomic DNA at DSMZ for GEBA-Actino and similar projects. … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Forming Scientific Connections and Building Community
… and also made new friends while working on their summer projects. Watch the short video here to see what they had to … below are the interns, their mentors, and their summer projects. Each intern also mentioned what they loved about … who were able to give me some guidance in my academic journey.” Mentors: Deze Kong & Yasuo Yoshikuni Project: “ …
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into … BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… microbial data sets for JGI users, which include projects looking at wildfire impacts, carbon cycling, and … working to address some of the most pressing challenges of our time. For more information, please visit  …
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