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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial … cycles. The information gained from understanding the interactions between microbes, hosts, and their environments … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers … accessible metagenomic datasets from a wide variety of ecosystems around the world, conducting iterative searches …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus … play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically important …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals … learning how environmental conditions influence viral-host interactions in three groups: cyanophages, bacteriophages, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … scientific research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The … a range of JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The best part of …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility located at … As a UEC member, he aims to help the JGI improve its interactions with the broader user and scientific community …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … gene expression in that set, implicated in AMF interactions, was dramatically reduced as a result of … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., …
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … Embargo : A period in which data is not publicly available in JGI systems or outside repositories. Full access is …
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