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… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… This single environmental trigger highlights efficiency for users … bacterium's entire metabolism for chemical production, the study provides a blueprint that engineers can use to design … specialty materials and high-value bioproducts. This study offers a template — integrative analysis of multiple …

… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE … researchers with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …

… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the plant’s genome … a longtime JGI collaborator and a senior author on this study. The use of switchgrass as a feedstock for …

… Harnessing BER-funded data resources, researchers built an … an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …

… In honor of the JGI's 25th anniversary in 2022, we have … from individual environmental cells. The proof of principle study built off earlier approaches and offered a way for researchers to study the planet’s microbial diversity, much of which …

… By leveraging new tools and large-scale data mining, JGI researchers … Impact This dataset gives researchers a new foundation for studying how fungi produce and manage energy at the cellular … First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … species that have been separated for millions of years. The study highlights the genes that could be used to make other …

… In honor of the JGI's 25th anniversary in 2022, we have … as multiple copies across the chromosomes. In a follow-up study , researchers focused on two types of naturally … JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving fungal rust pathogen …

… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …

… Retracing how the dry rot Serpula lacrymans adapted to a new … rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the genomic … to sustainable, alternative biofuels and bioproducts. This study lends insights on how the fungus has responded to …

… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more … optimization. Summary Life is all about balance. This study,  recently published in the  Proceedings of the … Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges funding from a National …