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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) … have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we provide a global analysis of the …
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Virus Discoveries that Keep Getting Bigger
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … approach for giant virus genomic discovery.  In 2020, a JGI-led team used this approach to deliver novel viral genomes from …
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Disclaimer
… statement of authorship are reproduced on all copies. The JGI is not responsible for the contents of any off-site …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus dynamics in a … comprehensively characterize viral-host interactions. The team discovered that the mat’s viruses specialize to single … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for … of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to develop computational methods … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the …
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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The fungus that made itself at home
… As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans … S. lacrymans var. shastensis has a similar genome, the team suggests that it has not adapted like the other strain …
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Refining the Process of Identifying Algae Biotechnology Candidates
… effort published in Communications Biology , a team involving researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The Scenedesmus genome was sequenced and assembled at the JGI. Sara Calhoun in Igor Grigoriev’s team at the JGI led …
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Tina Clarke
… (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area … Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June 2017 – present Berkeley National …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to work on the … genome sequence of green millet ( Setaria viridis ). The team of researchers at the Danforth Plant Science Center …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … sorting and non-standard molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid …
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