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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 … & Applications (VEGA) Symposium. The work also used resources of the National Energy Research Scientific Computing …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published … Grigoriev’s recent work includes the discovery of anaerobic fungi’s ability to break down lignin , the hardiest of plant …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Open Frameworks Training the Next Generation of Scientists
… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … students developing skills in fungal biology and genomics. Fungi can be better understood through reference genomes, … to connect educators and empower them to utilize program resources. MICROnet is  built around a community of …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome … they regulate their genomes, but is not well understood in fungi. A team of researchers reported on the largest … no. DE-AC02-05CH11231. The Georgia Advanced Computing Resource Center (GACRC) and Georgia Genomics and …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play important roles in areas ranging from industrial … information for an uncultivated virus genome, including the source, methods of identification of the virus genome, and …
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Virus Discoveries that Keep Getting Bigger
… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … genomes than many bacteria. Until recently, understanding of giant viruses came primarily from sampling an … In 2020, a JGI-led team used this approach to deliver novel viral genomes from freshwater, sewage, and marine …
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