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Comparative genomics analysis of drought response between obligate CAM and C3 photosynthesis plants
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team set out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … these boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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JGI Accepts 17 Proposals for Community Science Program
… total of 17 proposals have been approved through the annual Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and …
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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JGI Announces 2025 New Investigator Portfolio
… proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our … plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals are accepted … call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. … any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, … Reference herein to any specific commercial products, process, or service by trade name, …
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Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… the metabolomic analysis capability available through the  Community Science Program (CSP) . This includes mass … researchers worldwide.  Q:  To what extent is natural soil a limit to identify molecules exchanged between plants … Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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