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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … in Europe, when seemingly innocuous ornamental plants like rhododendrons and azaleas became unintentional Trojan … Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the …
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Yellowstone Lake Nanoarchaeota
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Insight Into the Molecular Mechanisms for Microcystin Biodegradation in Lake Erie and Lake Taihu
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Viruses Reprogram Cells into Different Virocells
… undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, it … from The Ohio State University and the University of Michigan studying how virus infections cause significant … metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … that presented the first large analysis of an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … their adaptations offers insights into microbial evolution, as well as how Antarctic microbial communities … of genes considered the flexible genome content that was likely acquired due to gene transfer events. Such events can …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team of researchers … finally resorting to explosives to succeed. Altiarchaea, like the Hornburg, have a history of countering multiple …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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JGI & KBase at PAG XXVII
… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … genomic sequence information to BER-funded activities of plant systems that make use of these resources will … for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex Chromosomes in the Moss Ceratodon 7:09 PM …
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iPHoP: A Matchmaker for Phages and their Hosts
… For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic … This work was supported by the U.S. Department of Energy, Office of Science, Biological and Environmental …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and … intricate connections, and many, many moving parts. A lot of these moving parts are proteins — amino acid structures …
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