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… of these algorithms, inspired by communication networks found in nature, allows machines to “learn” features. … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … models (HMMs), “You just compute the distance between two vectors,” said Sevim.  While there are alignment-free …

… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Cole, have been leading these efforts, which included two  workshops with resulting reports and a  perspective … Research Grant   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … DNA insertion, the new system, CRAGE-Duet, can accommodate two DNA constructs, doubling the amount of DNA that can be …

… called pectin and hemicellulose. While these two polysaccharides can yield sugar monomers, it’s only with … pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in the bee’s … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …

Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on … please visit  energy.gov/science/office-science . … IMG/VR data portal …

Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … (Berkeley Lab), is to become the leading integrative genome science user facility enabling researchers to solve …

Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … as Fungal and Algal Program Head at the DOE Joint Genome Institute, a Senior Scientist at Lawrence Berkeley … terrestris .  Nat Biotechnol. 2011; 29: 922-927. Eastwood DC et al. The plant cell wall-decomposing machinery …

… breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to …

Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so … collected at each sampling site, were compiled into the Genome Resolved Open Watershed database (GROWdb). The team …