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Next-generation transcriptome assembly
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic … of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, built a …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with … The JGI uniquely offers the first quantitative Stable Isotope …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … Brachypodium distachyon is a small annual grass that is well …
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New Research Sheds Light on Diversity in the Deep Sea
… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … and maize, sugarcane can grow on nutrient-poorer soils and does not need to be planted annually. The modern sugarcane …
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Secondary Metabolites Advisory Committee
… The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The Committee is chartered to render advice, … operations, and scientific relevance and quality. The SMAC does not perform management functions nor do they direct the … teams on how to operate and manage the particular Science Program. …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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