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JGI@25: Mapping Switchgrass Traits with Common Gardens
… switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and genetic information has allowed the research team … biomass-based fuels.   … P. virgatum on Phytozome … Plant Dataset …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, … he curated several small sets of phylogeny, biosample metadata tasks we assigned.”       Click here to watch a video …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
I started this, uh, summer internship was working with big data, but something that I learned from this program was how … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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Three Join the JGI User Executive Committee
Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … early career researchers and new users, advise on data release and sharing policies, and help develop programs …
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JGI announces second round of 2023 New Investigator awardees
Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why …
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Graduate Students Get Thesis Research Opportunity at the JGI
JGI’s User Programs deputy and head of the Microbial Systems group. Tringe’s research group focuses on the roles … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving … develop the omics methodologies into workflows with the DOE Systems Biology Knowledgebase (KBase) , in collaboration …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each … grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their …
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Streamlining Regulon Identification in Bacteria
… environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …
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Busting the Unbreakable Lignin
Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes … . The study’s pivotal NMR (nuclear magnetic resonance) data, gathered using magnetic fields to diagnose electronic …
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Digging into Microbial Ecosystems Deep Underground
… pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado State University GI users … at: the role viral infection may play in other natural ecosystems. The video complements a recently published paper …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI …
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