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… related to our Integrated Microbial Genomics & Microbiomes portal. …

… it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of environmental … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …

Genomes from uncultivated bacteria offers clues to ancestral … Communications , two research teams joined forces and data sets to describe bacterial genomes for related … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating … Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior to his tenure with …

… as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley National … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized …

Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from …

… lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high … Winner” — “Piggyback the Winner.” In the microbial mat, the data suggest viruses are indeed piggybacking their hosts. …

… to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … file.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …

… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In … All of these genomes are available on the JGI plant portal  Phytozome . “The broad applicability of the method …

… works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other organisms – … is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences …