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… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … genomes are more difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …

… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding … added. “We must be careful who we ask to take on these projects due to their difficulty and complexity, but we have …

… 2023 marked a decade since the inception of the flagship internship program … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … his post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National Laboratory, he has …

… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … into a sentence. The transcriptomes edit out these distractions. Combining genome and transcriptome information … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … to use billions of tons of the carbon dioxide trapped in biomass each year to do so. As such, they are considered …

… A group led by JGI scientists have made strides in improving and applying a method that allows researchers … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the addition of …

… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and … gene expression in that set, implicated in AMF interactions, was dramatically reduced as a result of …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …

… An article summarizing the field of viral metagenomics, authored by JGI … Nayfach and  Nikos Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . … photosynthetic cyanobacteria found throughout the planet’s oceans can exert great influence on earth’s carbon and …

… Janey provides support for custom single-cell user projects and projects within the group. …