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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… collaboration.  JGI Director Nigel Mouncey reflected on how the JGI-UC Merced Intern partnership had become a … and alumni shared their perspectives on the program and how much it meant to be a part of it all. Among them was … , a JGI research scientist and program mentor, discussed how “advocating and listening to the interns and learning …
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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Persistent memory as an effective alternative to random access memory in metagenome assembly
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Supporting Global Research into Actinomycetes
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Nikos Kyrpides
… bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the … Nat Microbiol . 6(7):960-970. Nayfach S, et al. (2021) CheckV assesses the quality and completeness of … Nature Biotechnol . 39(5):578-585. Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature …
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JGI@25: The Little Alga That Could
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … also contains hundreds of genes uniquely associated with carbon dioxide capture and the generation of biomass, making … of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost …
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Evolution of a Fungal Gene Expression Regulator
… methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood …
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Genome and proteome analyses show the gaseous alkane degrader Desulfosarcina sp. strain BuS5 as an extreme metabolic specialist
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Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… on enzymes that have been evolving for billions of years. However, these enzymes are often loosely understood, leaving … (ATs). These enzymes play a crucial role in how an organism processes both carbon and nitrogen. This research team combined …
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Corals in Hot Water Get Help From Their Microbes
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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