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Crysten Blaby-Haas
… user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … Services Honoree, 2022 Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Stage-resolved gene regulatory network analysis reveals developmental reprogramming and genes with robust stem-preferred expression in sorghum
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DAP-seq Drives Robust Mapping of Gene Regulation
… advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … for shaping what a certain cell type looks like.” These recent innovations have propelled the creation of a vast … developing genome-scale engineering technologies to produce biofuels and bioproducts. “We developed these methods and …
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Georg Rath
… the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of … of Molecular Biotechnology, Vienna) and the High Field MRI Centre in Vienna, where he first stumbled from software development into building productive infrastructure in close …
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JGI Early Career Researchers Featured in mSystems Special Issue
… traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … Roux are part of the first cohort to receive Early Career Development awards as part of the Laboratory-Directed …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … the man I’d want to be in a fox hole with. You are 100 percent dependable. Your ethics always point due north.” Joe … address some of the most pressing challenges of our time. For more information, please visit  …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … interest. Nature Methods paper coauthor Lee did the initial development of a streamlined workflow that reduces the time … a principal investigator at the Szeged Biological Research Center in Hungary. His approved proposal through the JGI’s …
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A Natural Mechanism Can Turbocharge Viral Evolution
… dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … Berkeley National Laboratory (Berkeley Lab), has looked for DGRs in a broad range of publicly available datasets. … for research and industry applications. Summary In their recently published Nature Communications article , the team …
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From Competition to Cooperation
… to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … transporters, were co-opted into symbiotic functions. Recently published in  Nature Communications , the work was … Food and Environment (INRAE), Hungary’s Biological Research Centre, Clark University, and the U.S. Department of Energy …
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Tracing the Evolution of Shiitake Mushrooms
… 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … genomes and their evolution could provide strategies for converting plant waste into sugars for  biofuel … when the largest mammal ever, Paraceratherium, still roamed central Asia. Afterward, Lentinula groups evolved further, …
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