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Genome R&D Group and is one of more than 100 scientists and systems engineers involved in computational work at the JGI. … function (Héctor García Martin of Berkeley Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew … Kristofer Bouchard, neuro- and data scientist in Biological Systems and Engineering / Computing Resources Division …

… is involved with multiple outreach programs promoting the advancement of women in STEM. Lisette Manriquez (2016 … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the coadvisement of …

Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA …

… handful of dirt, and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools … stage. “I would argue RNA viruses globally are even less known than DNA viruses,” said Simon Roux , a JGI scientist … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …

… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … liquid transfer and microfluidics, to minimize molecular biology reactions, increase throughput, and enable … analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A …

A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… climate resilient switchgrass for bioenergy production. Building on the framework provided by our new switchgrass …

… products and their derivatives during her Ph.D. in Microbiology at the Eberhard Karls University Tübingen (Germany), … Innovation Research (SBIR) grants, UAEU Program for Advanced Research (UPAR) Grant Competition, ANR, ASF, … 35, 725-731. Mukherjee et al. 2017. 1,003 reference genomes of bacterial and archaeal isolates expand coverage …

… review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to …

… context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … “Applying Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am Convention Center, Rm …

Hardworking Team Todd Anderson , Director of the Biological Systems Science Division at DOE Office of Biological and … Nigel Sussman recently finished at the Integrative Genomics Building, the JGI’s home at Berkeley Lab. Like the mural, … they grow into big headaches.” He reminisced over the building of the Integrative Genomics Building, the JGI’s …