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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … that the JGI’s very first project — the revolutionary work of the human genome project, which spanned nearly two decades, was filled with ups and downs, challenges and triumphs, and a lot of hard …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For … sorbed to the clays. Sandy soils are much more likely to work well for metabolomics.  Q:  What tool or method is …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… for sequences of RNA viruses in large data sets, their work may be akin to finding a single snowflake on a … JGI’s Nikos Kyrpides that his Microbiome Data Science group was also working on RNA virus mining. After a couple of … the world. One expanded group is of viruses associated with bacteria; until now, most of the known RNA viruses have been …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
To set up flexible, repeatable experiments on plants and microbes, … chambers let researchers around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos …
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Learning to Look
… case, the machine “learned” to identify a certain type of bacterial viruses or phages called inoviruses, which are … a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents … The search tool Roux and his colleagues developed first worked on a reference dataset that included genome sequences …
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JGI on the 2020 Highly Cited Researchers List
… year in the Web of Science.” Less than 6,200 researchers working in 21 fields appear on the list, and those from the … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part of an … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have … Prize in Chemistry to seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the Nobel … “a revolutionary impact on the life sciences.” Building upon CRISPR-Cas9 work, the Doudna lab at UC Berkeley seeks …
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Methane Makers in Yosemite’s Lakes
… (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. … affects freshwater ecosystems, and how those ecosystems work. …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental … sessions, thought-provoking flash talks, and instructive workshops. Researchers from academia, government, and … back for more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … …
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Katherine Louie
… from diverse biological and environmental samples in support of user science.  Capabilities offered by the … of a strong core foundation of robust mass spectrometry workflows for polar and nonpolar metabolite analysis, … BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proc …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at … as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In …
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Enlarging Windows into Understanding Gene Functions
Ronan O’Malley , who leads the Sequencing Technologies Group. In an article published November 25, 2021 in Nature … coauthor Lee did the initial development of a streamlined workflow that reduces the time and cost associated with this … what TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five …
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