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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Silver age of GOLD introduces new features
… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … entered by external users. The Impact One of the significant challenges in maximizing genomic data usage is having … scheme to better define the genomic information and ecosystems. These curated data are accessible on JGI data …
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DAS Tool for Genome Reconstruction from Metagenomes
… individual contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … on biofuels and bioproducts. For example, Sabeeha Merchant of the University of California, Berkeley studies the … Scientific Focus Area (SFA), supported by the Terrestrial Ecosystem Science (TES) program within the DOE Office of …
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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … ever-higher levels of throughput. We also develop methods for efficient QA/QC based on next-generation sequencing … The applications group is focus on developing methods for converting digital information from sequence databases …
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Disclaimer
… NOTICE Information from this server resides on a computer system … the United States Government nor the University of California nor any of their employees, makes any warranty, express or implied, including the warranties of … by the United States Government or the University of California. The views and opinions of authors expressed herein …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic … Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … supported by the National Science Foundation (NSF) under grant DEB-1442348. The work (proposal:  …
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