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… sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … of whole transcriptomes, and the third is determining the 5’-ends by 5’-end sequencing, from which those promoter …

… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal … , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. Over its 23-year …

Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … instructions for building and maintaining cells through the use of deep-sequencing technologies. The internship program …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two … an early algorithm and developing it in order to talk about the subgenome identity.”  These days, Session is …

… from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in … home located in the heart of the Berkeley Lab main campus. On Monday, November 11, a week after they’d been  moved … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … selected through peer review from 41 full proposals out of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable …

… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … be applied to biotechnology and medicine. A more robust understanding of these microbial communities could lead … the ocean through vents at temperatures that can exceed 750 degrees Fahrenheit. The minerals in these fluids include …

… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two … the U.S. DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and SSM was supported by the …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … User Facility, is supported under Contract No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology …

… production. A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international … the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In … foundational genetic information that crop breeders can use to improve sugarcane varieties and advance a sustainable …

… large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring … genomics can add significant value to the other commonly used culture-independent sequencing approaches including … the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to biotechnology and …