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Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep
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Phylogenetic proximity is a key driver of temporal succession of marine giant viruses in a five-year metagenomic time-series
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating …
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Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis
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JGI announces first round of 2023 New Investigator awardees
… eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and … address some of the most pressing challenges of our time. For more information, please visit  …
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John Vogel
… he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … Dr. Rochon from Agri-Food Canada at Summerland BC aimed to generate whole genome data of Olpidium. This required an …
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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences … the model, the team used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … impact of user projects, develop cutting-edge approaches for and with users, and create computational tools and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … 8X switchgrass is a valuable resource towards the effort to generate climate resilient switchgrass for bioenergy …
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