Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Biodesign
      • Metabolomics
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics
    • Committees
      • JGI User Executive Committee
      • JGI Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Breadcrumb

  1. Home
  2. Search

Search

Results


John Vogel
… Links to experimental resources and background information are available here . … Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal 79: 361–374 DOI: 10.1111/tpj.12569 Hsia, et. al. 2017 … the JGI Brachypodium distachyon T-DNA collection. Plant Journal 91(3): p. 361-370. Vogel, et. al., 2010 Genome …
Learn more
De novo DNA synthesis using polymerase-nucleotide conjugates
Learn more
Here, There and Everywhere: Large and Giant Viruses Abound Globally
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Microbial Program . The team mined more than 8,500 publicly available metagenome datasets generated from sampling … could be assigned to viral lineages, and predominantly in samples from marine (55%) and freshwater (40%) environments. …
Learn more
Doubling Down on Known Protein Families
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of these communities via whole genome sequencing of the samples, without being able to distinguish which gene … genes were typically discarded from any analysis as useless information. These represent the ‘unknown unknowns’ because …
Learn more
JGI@25: The Little Alga That Could
… 2007 the full genome was sequenced and published in the journal Science . At the time, the project was co-led by Daniel … of polycistronic genes within Chlamy, meaning that its RNA can produce up to four proteins, which has far-reaching … is that in eukaryotes, one protein is produced from one RNA,” Merchant said. Rory Craig, a former JGI intern now a …
Learn more
For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as well as publicly available metagenomes, they analyzed both host and …
Learn more
Tracking the Origins of Methane-Producing Microbes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from … lineages. The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone … spring. The researchers applied mini-metagenomics to these samples by sorting the microbes into small pools of cells …
Learn more
Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, including researchers … and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. …
Learn more
Boosting Small Molecule Production in Super “Soup”
… work complements efforts to further develop sustainable alternative approaches for manufacturing bioproducts and … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … systems for metabolic pathways that we plan to offer to users in the near term,” added JGI Director Nigel Mouncey . …
Learn more
The More the Merrier: Making the Case for Plant Pan-genomes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … individual genome highlighting the fact that the genetic information in a single reference genome is insufficient. … took place a million years apart: the individual with a maternal  B. distachyon parent (D plastotype) some 1.4 million …
Learn more
How Maize Makes An Antibiotic Cocktail
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program . And …
Learn more
From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … fungal genomes covering the entire kingdom of fungi. “The information from this project may also have a practical … et al. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution . …
Learn more

Pagination

  • First page « First
  • Previous page ‹‹
  • …
  • Page 28
  • Page 29
  • Page 30
  • Page 31
  • Page 32
  • Page 33
  • Page 34
  • Page 35
  • Page 36
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Industry Partnerships
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2026 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback