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… alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can help researchers better model … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … As such, JGI is involved in a broad variety of genomics projects that relate to energy and the environment.” she … researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on …

… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team …

… Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and … develop the overall experimental design, sequenced the RNA from nearly 400 root and leaf samples and helped analyze …

… and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … Control to Database/Java Based Process in Gold Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, …

… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository Letter … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  …

… which combines an in vitro transcription assay with RNA sequencing, they were able to identify the target genes … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated …

… Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … consortium, they  conducted a large-scale comparison of 135 fungal sequenced genomes to understand how plants and fungi … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …

… Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to …

… Colleen J. Doherty, Adrian A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, … N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … for this ongoing call; the next deadline for proposal submission is Sept. 8, 2026, for inclusion in the October …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …