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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has … … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type …
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A Plant Root Atlas for Tracking Developmental Trajectories
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …
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JGI announces 2024 Functional Genomics awardees
Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance … atmospheric carbon sequestration into sustainable biomaterials, and developing high-throughput methods to reveal …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me …
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JGI on the 2021 Highly Cited Researchers List
Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … JGI staff who mentored students this past year, through programs including the JGI-UC Merced Genomics Internship … hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … use CRISPR-Cas systems to recognize and remove invaders’ DNA from their own genomes. One of these systems, the … Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … program managers, and intern alumni will introduce projects designed for students to gain research experience …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … some experience with OpenACC or CUDA – links to training materials will be sent out. The main benefit is professional …
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Fishing for Novel Cellulose Degraders
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … cellulases from their captured genomes, the team then used DNA synthesis and cloning, followed by protein in vitro … User Facility, is supported under Contract No. DE-AC02-05CH11231. The work was supported by a JGI Director’s …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …
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