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Dan Rokhsar
… computational methods applicable to the diverse eukaryotic species, which they have applied and refined in the …
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JGI Announces 2025 New Investigator Portfolio
… including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, …
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Katherine Louie
BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proc …
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Rex Malmstrom
… interactions in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… study, they’ve cracked open the genome of another polar species, the green alga Microglena sp. YARC, which also … and gene regulation.  Mock and his team then linked those species-level observations with data on microalgal … committed to advancing genomics in support of DOE missions related to clean energy generation and environmental …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… occurring ploidy levels, called cytotypes, across the species. These are primarily tetraploids (4X or four copies … be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped that … water loss, compared to the process used by most plant species.) Understanding how the interplay between gene flow, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… for understanding the microbiome of the earth, but most species do not grow easily in the lab. To access the genomes … counterpart. In this approach, DNA from all the different species is mixed together and shredded up before sequencing, …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Center), HudsonAlpha and the JGI also identified a gene related to seed dispersal in wild populations for the first …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
Berkeley Lab scientists discussed a diverse range of topics related to structural biology, single cell and systems … the visitors, who saw the latest advancements in imaging-related technology and instrument-analytical methods.  “The … committed to advancing genomics in support of DOE missions related to clean energy generation and environmental …
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SPRUCE-ing Up Science
… and Duke University, published their research related to how bacteria that colonize the roots of sphagnum … which computer program would best serve their quests related to processing RNA-sequencing information. According …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in order … high-quality genome assemblies and annotations for 35 species representing all major evolutionary lineages in the … genome. Instead, it seems many of the fern’s defense-related gene families were snatched from bacteria. The …
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JGI on the 2021 Highly Cited Researchers List
Santa Barbara, he and his colleagues found that anaerobic fungi from herbivore poop might be a new source of novel …
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