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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … controls of nitrous oxide pulses in rewetted forest soils: An integrated -omic and isotopic approach” 12:39pm … of Arizona (lightning talk): “Effect of drought on soil microbial metabolisms driving carbon allocation and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … researchers worldwide.  Q:  To what extent is natural soil a limit to identify molecules exchanged between plants … analysis directly from the rhizosphere in natural soil? A:  It depends on the soil. Typically soils that have …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages … Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, …
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're doing with those …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … and repair themselves or eliminate waste. The Impact The bacteria, archaea and other microorganisms of the microbial … shrimp and crabs also live near these vents, feeding on the bacteria and other microorganisms that live there.  …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum …
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JGI Announces 2026 New Investigator Portfolio
… A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, … plant metabolism across diverse ecosystems — from Antarctic soils and Icelandic hydrothermal systems to coastal wetlands … plant–microbe interactions that enhance crop resilience and soil health. Proposals are accepted year-round for this …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M … Alabama A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … is the area surrounding the roots of a plant in the soil. And I’m specifically working with a grass plant that’s …
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