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Learning to Look
… distinguishing features. Several characters may be spotted with a striped scarf, striped hat, round-rimmed glasses, or … known to be affiliated with the Inoviridae. “What we’re really doing is looking for a particular gene found in all … habitat—including soil, water, and humans—around the world. By the numbers, the new approach detected inoviruses …
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Fungus Fuels Tree Growth
… root cells. The fungus is almost always found among and within poplar trees, and in an effort to understand its … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … or mycorrhizal fungi (mutualist symbionts that induce structural changes in plant roots),  M. elongata  …
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How to Target a Microbial Needle within a Community Haystack
… in generating genome sequences for members of the microbial world through bulk community sequencing (metagenomics) and … would allow researchers to focus on specific microbes within metagenome samples and associate their sequences with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Tour the IGB
… zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, tools like … domains. We also work with our partners to build infrastructure in support of new analysis techniques.  Notice Data …
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Complete genome sequence of Mesorhizobium australicum type strain (WSM2073T)
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking … scientists and biotechnological engineers all over the world continued to seek other ways to make morels fruit …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users … metabolomic, imaging, sensor, and other data produced at scales amenable to statistical analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms …
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Natural Prodcast
… is a “fireside chat”-style podcast about natural products and the science and scientists of secondary metabolism. … to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … field about current and future developments, and how the JGI can be part of that space.   …
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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De novo Nanopore read quality improvement using deep learning
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