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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … a limit to identify molecules exchanged between plants and microbiomes during interactions? Is it reliable performing … the metabolomics and transcriptomic data? A:  We use MAGI. Reference: Erbiligin et al.  MAGI: A Method for Metabolite …
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Four Draft Single-Cell Genome Sequences of Novel, Nearly Identical Kiritimatiellaeota Strains Isolated from the Continental Deep Subsurface
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … Institute for Agricultural Research (INRAE) to sequence a reference genome for the fungus Phakopsora pachyrhizi , a …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … and how these conditions impact the crop and its microbiome. For three consecutive years (2016-2018), …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Characterization of the Clostridium thermocellum AdhE, NfnAB, ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum
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The INSIG2 rs7566605 genetic variant does not play a major role in obesity in a sample of 24,722 individuals from four cohorts
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at … also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … arise when different ancestral species crossbreed before genome doubling. In allopolyploids, the set of …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: An integrated …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage …
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