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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … best in certain regions. Most plant species have adapted to their local environments; for example, crop and … reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building off this …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  … The U.S. Department of Energy Joint Genome Institute, a DOE … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for … of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … from different phyla are capable of methanogenesis. Using metagenomics eliminates confirmation bias, because it …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy … alters genomic diversity, fitness, and adaptability. Using a combination of genomic, quantitative genetic, … More genome copies in switchgrass leads to increased climate … From our partners …
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … I have been working with Zyiah and Tamyra this summer and teaching them more about how to analyze data. Zyiah Mikes : … lab. We've been focused on analyzing plant microbiome data using different programming languages such as Python, Bash, …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources … with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large … of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … viruses from environmental sequences across the globe, then using these sequences to make inferences about the …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science … The U.S. Department of Energy Joint Genome Institute, a DOE … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … was done through the JGI Community Science Program . Using an ecology metric called beta diversity, the team …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … that showcase our collaborations and capabilities to enable great science that will help solve energy and … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers … head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to …
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