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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … to as the dirt-to-shirt value chain. Assembling cotton’s large and complex genome means being selective in choosing …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … to experimental manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, …
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JGI@25: From Life at the Extremes to Editing Genomes
… nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of microbial …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … reviewed and assigned NCBI taxonomy name and IDs for nearly 20,000 public/private mtagenome biosamples in GOLD. “Besides …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group … and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … the JGI as an Instrumentation Engineer where he added structure and process to the group by developing SOPs for …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … looking forward to presenting on these findings and the larger implications of the work. In addition to preparing … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their … postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … community of a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … To researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … a gene that encodes for an enzyme called RNS-directed RNA Polymerase (RdRP), necessary for replicating the RNA genome …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in multicellular …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … this as general as possible, but scientists love technical jargon. If you don’t have that background, well, everybody … I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise …
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