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… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … Stable Isotope Probing (SIP) has opened vast windows into specific activities catalyzed by microbial communities. By … SIP experiments can show which species actively munch on a specific chemical compound. By feeding a microbial community …

… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … While large protein databases, like UniProt, exist, are not specific enough for a microbial community like that from a … map microbial activity, Baldrian’s team distinguished four specific habitats within the forest floor: the leaf litter …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow …

Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … orientalis strains., Microbial Spectrum , 2024 Wu et al.Metabolic engineering of low-pH-tolerant non-model yeast, … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …

Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team of researchers … by incorporating short sequences from infecting viruses and phages. In these sequences are virus fragments called …

… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container … algal genome and analyzed its metabolome to understand the metabolic processes involved in responding to various …

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … and associated microbial communities. This revealed key metabolic pathways and metabolites associated with the …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny … Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile for a not very well …